MLOC_69179 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains137.526152.807144.138132.622
LEAShoots from the seedlings (10 cm shoot stage)161.886205.32258.478158.895
INF1Young developing inflorescences (5mm)85.761397.306898.612971.0773
INF2Developing inflorescences (1-1.5 cm)70.035885.230575.57676.5039
ROORoots from the seedlings (10 cm shoot stage)225.188184.36171.512202.216
NODDeveloping tillers at six leaf stage, 3rd internode124.735152.279224.485490.283
CAR5Developing grain, bracts removed (5 DPA)155.189139.899133.039123.79
CAR15Developing grain, bracts removed (15 DPA)47.208546.516346.031496.4627



CDS Structure of MLOC_69179






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69179.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249569.1NoneNoneNoneNone
MLOC_69179.4CUST_5729_PI427708080AvailableAvailablecontig_56033 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g26650.2 +1 0.0 769 390/431 (90%) 13102.m02884 protein delta14-sterol reductase, putative, expressed
TAIR PP10 AT1G50430.1 +1 0.0 692 346/432 (80%) | Symbols: DWF5, PA, LE, ST7R, 7RED | Ergosterol biosynthesis ERG4/ERG24 family | chr1:18682175-18685555 REVERSE LENGTH=432