- Predicted Gene MLOC_69179
MLOC_69179 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 137.526 | 152.807 | 144.138 | 132.622 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 161.886 | 205.32 | 258.478 | 158.895 |
INF1 | Young developing inflorescences (5mm) | 85.7613 | 97.3068 | 98.6129 | 71.0773 |
INF2 | Developing inflorescences (1-1.5 cm) | 70.0358 | 85.2305 | 75.576 | 76.5039 |
ROO | Roots from the seedlings (10 cm shoot stage) | 225.188 | 184.36 | 171.512 | 202.216 |
NOD | Developing tillers at six leaf stage, 3rd internode | 124.735 | 152.279 | 224.485 | 490.283 |
CAR5 | Developing grain, bracts removed (5 DPA) | 155.189 | 139.899 | 133.039 | 123.79 |
CAR15 | Developing grain, bracts removed (15 DPA) | 47.2085 | 46.5163 | 46.0314 | 96.4627 |
CDS Structure of MLOC_69179
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_69179.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g26650.2 |
+1 |
0.0 |
769 |
390/431 (90%) |
13102.m02884 protein delta14-sterol reductase, putative, expressed |
TAIR PP10 |
AT1G50430.1 |
+1 |
0.0 |
692 |
346/432 (80%) |
| Symbols: DWF5, PA, LE, ST7R, 7RED | Ergosterol biosynthesis ERG4/ERG24 family | chr1:18682175-18685555 REVERSE LENGTH=432 |