MLOC_69163 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.03947620.067750600.0903219
LEAShoots from the seedlings (10 cm shoot stage)0.1679780.2962131.292820.584157
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.5528240.2076331.061180.451085
NODDeveloping tillers at six leaf stage, 3rd internode0.05179840.0250030.01003160.080334
CAR5Developing grain, bracts removed (5 DPA)0.03145240.05862240.0329930.061778
CAR15Developing grain, bracts removed (15 DPA)0.3078930.34256500.70219



CDS Structure of MLOC_69163






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69163.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365149NoneNoneNoneNone
MLOC_69163.1CUST_5728_PI427708080AvailableAvailablecontig_5601 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g43520.1 -3 4e-68 233 136/239 (57%) 13106.m04554 protein cytochrome P450 71D7, putative, expressed
TAIR PP10 AT5G32440.1 -3 3e-35 133 96/280 (34%) Ubiquitin system component Cue protein | chr5:12077014-12078396 FORWARD LENGTH=264