MLOC_69162 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.540814.933714.751513.6453
LEAShoots from the seedlings (10 cm shoot stage)15.095312.461715.611510.344
INF1Young developing inflorescences (5mm)30.523926.027821.797922.2107
INF2Developing inflorescences (1-1.5 cm)19.213118.180119.284420.223
ROORoots from the seedlings (10 cm shoot stage)12.864115.29715.904615.0329
NODDeveloping tillers at six leaf stage, 3rd internode1.888291.390234.18164.22735
CAR5Developing grain, bracts removed (5 DPA)25.234122.348522.02222.2202
CAR15Developing grain, bracts removed (15 DPA)8.957797.869256.5157618.6166



CDS Structure of MLOC_69162






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248623.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248623.1CUST_18582_PI427708080NoneNoneNone
MLOC_26885.1NoneAvailableNonecontig_1787358 (Not mapped)
MLOC_28079.1NoneAvailableNonecontig_1889095 (Mapped)
MLOC_39522.1NoneAvailableNonecontig_2553743 (Mapped)
MLOC_69162.1NoneAvailableAvailablecontig_5601 (Mapped)
MLOC_7313.1NoneAvailableNonecontig_1389905 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----