MLOC_69140 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1898.821513.421660.230
LEAShoots from the seedlings (10 cm shoot stage)1394.371681.471619.970
INF1Young developing inflorescences (5mm)980.829983.563904.1050
INF2Developing inflorescences (1-1.5 cm)1296.32798.8031186.150
ROORoots from the seedlings (10 cm shoot stage)3221.851897.32237.670
NODDeveloping tillers at six leaf stage, 3rd internode2618.62680.32300.360
CAR5Developing grain, bracts removed (5 DPA)915.577731.653771.0330
CAR15Developing grain, bracts removed (15 DPA)253.117251.533235.4460



CDS Structure of MLOC_69140






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69140.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252992.1NoneNoneNoneNone
MLOC_69140.1CUST_5726_PI427708080AvailableNonecontig_55988 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g42090.5 +2 0.0 668 331/384 (86%) 13104.m04141 protein CPuORF7 - conserved peptide uORF-containing transcript, expressed
TAIR PP10 AT3G25570.2 +2 6e-117 358 193/350 (55%) Adenosylmethionine decarboxylase family protein | chr3:9287413-9288462 REVERSE LENGTH=349