MLOC_6913 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.72972 | 5.12208 | 5.15054 | 7.02861 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.78 | 4.64518 | 5.25441 | 5.35248 |
| INF1 | Young developing inflorescences (5mm) | 8.90632 | 9.07951 | 8.62077 | 9.11245 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.5501 | 10.7721 | 12.074 | 15.3624 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.94261 | 6.97521 | 7.16312 | 12.4462 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.34433 | 6.13896 | 9.99836 | 28.2342 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.0952 | 9.50303 | 9.95331 | 12.3834 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.55623 | 5.12956 | 5.55771 | 15.3252 |
CDS Structure of MLOC_6913
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6913.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g01690.1 |
+2 |
3e-44 |
156 |
113/167 (68%) |
13109.m00084 protein expressed protein |
| TAIR PP10 |
AT2G15270.1 |
+2 |
4e-30 |
116 |
66/82 (80%) |
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1168 (InterPro:IPR009548); Has 1930 Blast hits to 1364 proteins in 219 species: Archae - 0; Bacteria - 44; Metazoa - 762; Fungi - 280; Plants - 96; Viruses - 3; Other Eukaryotes - 745 (source: NCBI BLink). | chr2:6637967-6639252 FORWARD LENGTH=194 |
