MLOC_69114 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7017761.330981.261471.23163
LEAShoots from the seedlings (10 cm shoot stage)62.2977164.31131.898103.317
INF1Young developing inflorescences (5mm)4.969374.255524.340163.99004
INF2Developing inflorescences (1-1.5 cm)3.049743.877254.470264.18133
ROORoots from the seedlings (10 cm shoot stage)0.7380861.63872.345061.95301
NODDeveloping tillers at six leaf stage, 3rd internode42.066448.298445.6748151.789
CAR5Developing grain, bracts removed (5 DPA)15.548215.018414.209314.9269
CAR15Developing grain, bracts removed (15 DPA)3.862366.0074.8298411.6414



CDS Structure of MLOC_69114






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69114.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248476.1NoneNoneNoneNone
MLOC_69114.2CUST_18375_PI427708080AvailableAvailablecontig_55825 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g41780.1 -3 0.0 921 466/542 (86%) 13110.m03906 protein chlorophyllide a oxygenase, chloroplast precursor, putative, expressed
TAIR PP10 AT1G44446.1 -3 0.0 731 373/529 (71%) | Symbols: CH1, ATCAO, CAO | Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain | chr1:16848664-16851152 REVERSE LENGTH=536