MLOC_69043 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.427917.730624.777820.5571
LEAShoots from the seedlings (10 cm shoot stage)0.1646440.19403500.143467
INF1Young developing inflorescences (5mm)0.1402990.06469880.03542080.0725927
INF2Developing inflorescences (1-1.5 cm)0.05674600.03513450.0690093
ROORoots from the seedlings (10 cm shoot stage)70.735561.32345.601565.9943
NODDeveloping tillers at six leaf stage, 3rd internode0.02427520.016851200.0573516
CAR5Developing grain, bracts removed (5 DPA)0.03570640.033602600.036376
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_69043






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69043.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367885NoneNoneNoneNone
MLOC_69043.1CUST_18374_PI427708080AvailableAvailablecontig_55825 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g43930.1 -2 2e-163 472 252/381 (66%) 13105.m04633 protein O-methyltransferase, putative, expressed
TAIR PP10 AT4G35160.1 -2 1e-51 182 117/374 (31%) O-methyltransferase family protein | chr4:16730989-16732808 REVERSE LENGTH=382