MLOC_69036 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.9115315.353413.701712.2185
LEAShoots from the seedlings (10 cm shoot stage)10.52296.478744.537156.24551
INF1Young developing inflorescences (5mm)43.429436.820436.61731.7093
INF2Developing inflorescences (1-1.5 cm)40.978438.211233.542840.4697
ROORoots from the seedlings (10 cm shoot stage)4.4330711.28039.4986212.0859
NODDeveloping tillers at six leaf stage, 3rd internode1.75892.408823.820639.17602
CAR5Developing grain, bracts removed (5 DPA)25.913722.491625.411222.904
CAR15Developing grain, bracts removed (15 DPA)4.953523.907765.4528210.1108



CDS Structure of MLOC_69036






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69036.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69036.1CUST_17808_PI427708080AvailableAvailablecontig_55799 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g12450.1 -1 0.0 1509 757/933 (81%) 13103.m01426 protein nucleoporin, putative, expressed
TAIR PP10 AT2G05120.1 -1 0.0 813 441/904 (49%) Nucleoporin, Nup133/Nup155-like | chr2:1842069-1846858 REVERSE LENGTH=1285