- Predicted Gene MLOC_69036
MLOC_69036 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_69036_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_69036_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 5.91153 | 15.3534 | 13.7017 | 12.2185 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.5229 | 6.47874 | 4.53715 | 6.24551 |
INF1 | Young developing inflorescences (5mm) | 43.4294 | 36.8204 | 36.617 | 31.7093 |
INF2 | Developing inflorescences (1-1.5 cm) | 40.9784 | 38.2112 | 33.5428 | 40.4697 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.43307 | 11.2803 | 9.49862 | 12.0859 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.7589 | 2.40882 | 3.82063 | 9.17602 |
CAR5 | Developing grain, bracts removed (5 DPA) | 25.9137 | 22.4916 | 25.4112 | 22.904 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.95352 | 3.90776 | 5.45282 | 10.1108 |
CDS Structure of MLOC_69036
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_69036.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g12450.1 |
-1 |
0.0 |
1509 |
757/933 (81%) |
13103.m01426 protein nucleoporin, putative, expressed |
TAIR PP10 |
AT2G05120.1 |
-1 |
0.0 |
813 |
441/904 (49%) |
Nucleoporin, Nup133/Nup155-like | chr2:1842069-1846858 REVERSE LENGTH=1285 |