MLOC_69019 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains449.405247.681248.556317.097
LEAShoots from the seedlings (10 cm shoot stage)122.32978.8784132.54497.2004
INF1Young developing inflorescences (5mm)302.809314.511324.849299.801
INF2Developing inflorescences (1-1.5 cm)234.193214.619224.221278.297
ROORoots from the seedlings (10 cm shoot stage)400.389215.462230.08301.166
NODDeveloping tillers at six leaf stage, 3rd internode17.352124.754447.716196.4582
CAR5Developing grain, bracts removed (5 DPA)180.062200.315181.155216.285
CAR15Developing grain, bracts removed (15 DPA)67.422261.018960.2004167.166



CDS Structure of MLOC_69019






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69019.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248662.1NoneNoneNoneNone
MLOC_69019.1CUST_5713_PI427708080AvailableAvailablecontig_55763 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g07709.1 +1 2e-88 265 143/152 (94%) 13107.m00759 protein ribosomal protein S13p/S18e, putative, expressed
TAIR PP10 AT4G09800.1 +1 4e-84 253 133/152 (88%) | Symbols: RPS18C | S18 ribosomal protein | chr4:6173818-6174963 FORWARD LENGTH=152