MLOC_69007 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.556137.636.155696.6998
LEAShoots from the seedlings (10 cm shoot stage)20.30120.221216.401416.0934
INF1Young developing inflorescences (5mm)9.6148410.11327.902898.0297
INF2Developing inflorescences (1-1.5 cm)5.038185.636074.485675.75198
ROORoots from the seedlings (10 cm shoot stage)0.7249851.497361.306451.63531
NODDeveloping tillers at six leaf stage, 3rd internode3.913244.5832410.560318.354
CAR5Developing grain, bracts removed (5 DPA)3.529543.553584.780923.84894
CAR15Developing grain, bracts removed (15 DPA)1.11581.190111.059212.66289



CDS Structure of MLOC_69007






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69007.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375176NoneNoneNoneNone
MLOC_69007.1CUST_5710_PI427708080AvailableAvailablecontig_55748 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g44330.5 +2 0.0 621 347/454 (76%) 13105.m10404 protein DJ-1 family protein, putative, expressed
TAIR PP10 AT4G34020.1 +2 3e-129 398 212/388 (55%) Class I glutamine amidotransferase-like superfamily protein | chr4:16298553-16300897 REVERSE LENGTH=472