MLOC_68996 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.493252.865832.393823.61635
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)19.20737.723096.6619910.2286
NODDeveloping tillers at six leaf stage, 3rd internode00.013060700.0948235
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_68996






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68996.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68996.1CUST_9279_PI427708083AvailableAvailablecontig_55729 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g19570.1 -2 3e-60 194 105/132 (80%) 13105.m02070 protein expansin precursor, putative, expressed
TAIR PP10 AT1G20190.1 -2 3e-46 157 80/131 (61%) | Symbols: ATEXPA11, EXP11, ATEXP11, ATHEXP ALPHA 1.14, EXPA11 | expansin 11 | chr1:6998762-6999710 REVERSE LENGTH=252