MLOC_68976 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.7216.100218.053717.0025
LEAShoots from the seedlings (10 cm shoot stage)11.89918.9323612.34878.06732
INF1Young developing inflorescences (5mm)7.167288.559397.189666.2446
INF2Developing inflorescences (1-1.5 cm)4.428654.014234.371474.43265
ROORoots from the seedlings (10 cm shoot stage)47.577733.664725.322633.4779
NODDeveloping tillers at six leaf stage, 3rd internode13.799117.1357.680436.2222
CAR5Developing grain, bracts removed (5 DPA)13.605813.06512.125411.789
CAR15Developing grain, bracts removed (15 DPA)2.631183.071832.303856.33265



CDS Structure of MLOC_68976






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68976.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367073NoneNoneNoneNone
MLOC_68976.1CUST_5705_PI427708080AvailableAvailablecontig_55677 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g49290.3 +2 0.0 888 463/498 (93%) 13105.m05274 protein 3-ketoacyl-CoA synthase, putative, expressed
TAIR PP10 AT1G19440.1 +2 0.0 767 392/488 (80%) | Symbols: KCS4 | 3-ketoacyl-CoA synthase 4 | chr1:6729119-6730669 FORWARD LENGTH=516