- Predicted Gene MLOC_68945
MLOC_68945 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 7.47852 | 7.39051 | 7.06534 | 7.24186 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.15361 | 3.66732 | 2.9029 | 2.9559 |
INF1 | Young developing inflorescences (5mm) | 15.4175 | 14.5982 | 14.8542 | 12.492 |
INF2 | Developing inflorescences (1-1.5 cm) | 12.8026 | 12.3776 | 11.9128 | 13.1234 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.09654 | 6.30865 | 6.80106 | 7.09034 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.32014 | 0.392234 | 1.5214 | 1.77868 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.85494 | 8.59186 | 9.55006 | 8.27259 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.31302 | 3.24159 | 2.7473 | 7.26618 |
CDS Structure of MLOC_68945
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68945.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g02150.2 |
+1 |
0.0 |
728 |
376/477 (79%) |
13104.m00133 protein tRNA methyltransferase, putative, expressed |
TAIR PP10 |
AT2G45730.1 |
+1 |
1e-157 |
466 |
258/470 (55%) |
eukaryotic initiation factor 3 gamma subunit family protein | chr2:18836519-18839123 REVERSE LENGTH=446 |