MLOC_68945 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.478527.390517.065347.24186
LEAShoots from the seedlings (10 cm shoot stage)4.153613.667322.90292.9559
INF1Young developing inflorescences (5mm)15.417514.598214.854212.492
INF2Developing inflorescences (1-1.5 cm)12.802612.377611.912813.1234
ROORoots from the seedlings (10 cm shoot stage)6.096546.308656.801067.09034
NODDeveloping tillers at six leaf stage, 3rd internode0.320140.3922341.52141.77868
CAR5Developing grain, bracts removed (5 DPA)8.854948.591869.550068.27259
CAR15Developing grain, bracts removed (15 DPA)3.313023.241592.74737.26618



CDS Structure of MLOC_68945






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68945.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369544NoneNoneNoneNone
MLOC_68945.2CUST_5701_PI427708080AvailableAvailablecontig_55619 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g02150.2 +1 0.0 728 376/477 (79%) 13104.m00133 protein tRNA methyltransferase, putative, expressed
TAIR PP10 AT2G45730.1 +1 1e-157 466 258/470 (55%) eukaryotic initiation factor 3 gamma subunit family protein | chr2:18836519-18839123 REVERSE LENGTH=446