MLOC_68931 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.1755910.2622560.233705
LEAShoots from the seedlings (10 cm shoot stage)00.32095600.248889
INF1Young developing inflorescences (5mm)000.2097750.143865
INF2Developing inflorescences (1-1.5 cm)0.4353650.1347290.1912010.284199
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode000.05191830.103197
CAR5Developing grain, bracts removed (5 DPA)475.391577.491442.084480.15
CAR15Developing grain, bracts removed (15 DPA)6.752986.84384.9174714.4677



CDS Structure of MLOC_68931






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68931.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68931.1CUST_15322_PI427708080AvailableAvailablecontig_55580 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g11130.1 +2 7e-17 72 29/50 (58%) 13104.m01008 protein DEF9 - Defensin and Defensin-like DEFL family, expressed
TAIR PP10 AT2G02120.1 +2 2e-13 63 25/48 (52%) | Symbols: PDF2.1, LCR70 | Scorpion toxin-like knottin superfamily protein | chr2:538319-538842 FORWARD LENGTH=77