- Predicted Gene MLOC_68931
MLOC_68931 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0.175591 | 0.262256 | 0.233705 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.320956 | 0 | 0.248889 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0.209775 | 0.143865 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.435365 | 0.134729 | 0.191201 | 0.284199 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0.0519183 | 0.103197 |
CAR5 | Developing grain, bracts removed (5 DPA) | 475.391 | 577.491 | 442.084 | 480.15 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.75298 | 6.8438 | 4.91747 | 14.4677 |
CDS Structure of MLOC_68931
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68931.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g11130.1 |
+2 |
7e-17 |
72 |
29/50 (58%) |
13104.m01008 protein DEF9 - Defensin and Defensin-like DEFL family, expressed |
TAIR PP10 |
AT2G02120.1 |
+2 |
2e-13 |
63 |
25/48 (52%) |
| Symbols: PDF2.1, LCR70 | Scorpion toxin-like knottin superfamily protein | chr2:538319-538842 FORWARD LENGTH=77 |