MLOC_68915 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.87659.737169.884859.54624
LEAShoots from the seedlings (10 cm shoot stage)15.469612.352414.564211.4214
INF1Young developing inflorescences (5mm)11.868812.267313.19389.59402
INF2Developing inflorescences (1-1.5 cm)7.887079.3197510.44279.29483
ROORoots from the seedlings (10 cm shoot stage)5.693414.929436.402335.62758
NODDeveloping tillers at six leaf stage, 3rd internode4.989024.702785.1734714.3277
CAR5Developing grain, bracts removed (5 DPA)10.82089.9738910.41729.27723
CAR15Developing grain, bracts removed (15 DPA)3.105492.919422.890256.35358



CDS Structure of MLOC_68915






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68915.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248792.1NoneNoneNoneNone
MLOC_68915.2CUST_5697_PI427708080AvailableAvailablecontig_55570 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g54020.1 +1 0.0 669 364/399 (91%) 13101.m05670 protein tRNA synthetase, putative, expressed
TAIR PP10 AT2G25840.1 +1 8e-172 504 260/342 (76%) | Symbols: OVA4 | Nucleotidylyl transferase superfamily protein | chr2:11021924-11025158 FORWARD LENGTH=408