MLOC_68912 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.04378030.0401470.02670160.0410749
LEAShoots from the seedlings (10 cm shoot stage)1.037680.5852110.6758320.644151
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.3010460.546880.3254960.595245
NODDeveloping tillers at six leaf stage, 3rd internode1.610152.014967.9968710.0491
CAR5Developing grain, bracts removed (5 DPA)0.060726700.01943930.0500236
CAR15Developing grain, bracts removed (15 DPA)0.2473810.452610.188450.847228



CDS Structure of MLOC_68912






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68912.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374291NoneNoneNoneNone
MLOC_68912.1CUST_5696_PI427708080AvailableAvailablecontig_55565 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g35630.1 +2 0.0 589 341/530 (64%) 13106.m03679 protein reticuline oxidase-like protein precursor, putative, expressed
TAIR PP10 AT5G44410.1 +2 8e-115 360 218/500 (44%) FAD-binding Berberine family protein | chr5:17891246-17892853 REVERSE LENGTH=535