MLOC_68904 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.923212.226463.153654.25182
LEAShoots from the seedlings (10 cm shoot stage)3.386141.576191.708762.35763
INF1Young developing inflorescences (5mm)2.253852.753191.488383.43934
INF2Developing inflorescences (1-1.5 cm)4.296113.081582.406845.40109
ROORoots from the seedlings (10 cm shoot stage)3.67222.316392.689254.16272
NODDeveloping tillers at six leaf stage, 3rd internode1.513363.365012.1955610.7872
CAR5Developing grain, bracts removed (5 DPA)2.179333.21342.692384.51676
CAR15Developing grain, bracts removed (15 DPA)0.2999580.158070.3375931.23544



CDS Structure of MLOC_68904






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68904.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68904.4CUST_13048_PI427708083AvailableAvailablecontig_55554 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g21970.1 -2 9e-21 94 45/45 (100%) 13102.m02462 protein 26S protease regulatory subunit 6B, putative, expressed
TAIR PP10 AT5G58290.1 -2 3e-20 92 44/45 (98%) | Symbols: RPT3 | regulatory particle triple-A ATPase 3 | chr5:23569155-23571116 FORWARD LENGTH=408