MLOC_68897 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.262480.1152780.1612690.157214
LEAShoots from the seedlings (10 cm shoot stage)0.18537800.1969860.167396
INF1Young developing inflorescences (5mm)0.095713000.0900214
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.7127571.292052.660481.48732
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)000.2229940.370533
CAR15Developing grain, bracts removed (15 DPA)0.2863450.1047980.1405470.478956



CDS Structure of MLOC_68897






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68897.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68897.1CUST_15316_PI427708080AvailableAvailablecontig_55538 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g08740.1 +3 2e-43 149 83/129 (64%) 13105.m00969 protein hydrolase, alpha/beta fold family domain containing protein
TAIR PP10 AT3G24420.1 +3 2e-35 127 58/117 (50%) alpha/beta-Hydrolases superfamily protein | chr3:8863111-8864883 REVERSE LENGTH=273