MLOC_68895 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.780812.67812.504313.0008
LEAShoots from the seedlings (10 cm shoot stage)33.889749.757447.800935.9512
INF1Young developing inflorescences (5mm)0.1225350.2241960.2198940.17951
INF2Developing inflorescences (1-1.5 cm)2.449382.786912.436892.96262
ROORoots from the seedlings (10 cm shoot stage)10.459711.6436.0811712.1022
NODDeveloping tillers at six leaf stage, 3rd internode34.448355.912733.3958124.323
CAR5Developing grain, bracts removed (5 DPA)1.8732.257882.458032.27643
CAR15Developing grain, bracts removed (15 DPA)13.571110.770818.250635.3155



CDS Structure of MLOC_68895






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68895.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248609.1NoneNoneNoneNone
MLOC_68895.2CUST_5693_PI427708080AvailableAvailablecontig_55533 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g43620.1 -2 6e-167 488 279/327 (85%) 13106.m04568 protein haemolysin-III, putative, expressed
TAIR PP10 AT5G20270.1 -2 1e-89 286 161/317 (51%) | Symbols: HHP1 | heptahelical transmembrane protein1 | chr5:6841025-6842656 REVERSE LENGTH=332