MLOC_6887 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 38.4907 | 43.0499 | 45.4593 | 51.9845 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 41.7123 | 22.7605 | 23.4731 | 27.1374 |
| INF1 | Young developing inflorescences (5mm) | 37.6301 | 35.5086 | 34.2235 | 34.7664 |
| INF2 | Developing inflorescences (1-1.5 cm) | 38.0344 | 38.5447 | 37.9731 | 48.9272 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 25.863 | 38.1927 | 34.9252 | 53.4709 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 80.464 | 62.0141 | 46.4718 | 214.851 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 40.5268 | 40.2065 | 40.671 | 47.4224 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.71147 | 6.01539 | 6.89857 | 17.9922 |
CDS Structure of MLOC_6887
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6887.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g36340.1 |
+2 |
4e-120 |
368 |
232/354 (66%) |
13111.m03556 protein lymphoid organ expressed yellow head virus receptor protein, putative, expressed |
| TAIR PP10 |
AT2G35880.1 |
+2 |
1e-44 |
166 |
136/326 (42%) |
TPX2 (targeting protein for Xklp2) protein family | chr2:15063204-15065259 REVERSE LENGTH=432 |
