- Predicted Gene MLOC_68860
MLOC_68860 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.91074 | 0.86423 | 1.11352 | 1.02871 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.28858 | 0.701544 | 0.6258 | 0.800201 |
INF1 | Young developing inflorescences (5mm) | 0.932892 | 1.42306 | 1.54395 | 1.23367 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.52854 | 2.77107 | 2.62143 | 3.19198 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.22595 | 1.80572 | 1.43301 | 2.53337 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.01344 | 2.94528 | 3.68625 | 11.0613 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.83432 | 8.58789 | 7.85789 | 8.5906 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.1586 | 2.31894 | 3.32939 | 6.3688 |
CDS Structure of MLOC_68860
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68860.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g35020.2 |
+3 |
3e-60 |
193 |
86/105 (82%) |
13111.m09171 protein yippee zinc-binding protein, putative, expressed |
TAIR PP10 |
AT4G27745.1 |
+3 |
1e-51 |
170 |
75/105 (71%) |
Yippee family putative zinc-binding protein | chr4:13840530-13841279 FORWARD LENGTH=106 |