MLOC_68860 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.910740.864231.113521.02871
LEAShoots from the seedlings (10 cm shoot stage)1.288580.7015440.62580.800201
INF1Young developing inflorescences (5mm)0.9328921.423061.543951.23367
INF2Developing inflorescences (1-1.5 cm)2.528542.771072.621433.19198
ROORoots from the seedlings (10 cm shoot stage)2.225951.805721.433012.53337
NODDeveloping tillers at six leaf stage, 3rd internode2.013442.945283.6862511.0613
CAR5Developing grain, bracts removed (5 DPA)6.834328.587897.857898.5906
CAR15Developing grain, bracts removed (15 DPA)2.15862.318943.329396.3688



CDS Structure of MLOC_68860






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68860.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68860.2CUST_9256_PI427708083AvailableAvailablecontig_55472 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g35020.2 +3 3e-60 193 86/105 (82%) 13111.m09171 protein yippee zinc-binding protein, putative, expressed
TAIR PP10 AT4G27745.1 +3 1e-51 170 75/105 (71%) Yippee family putative zinc-binding protein | chr4:13840530-13841279 FORWARD LENGTH=106