MLOC_68843 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2110240.457090.4814810.426094
LEAShoots from the seedlings (10 cm shoot stage)0.3908760.675240.3948880.424775
INF1Young developing inflorescences (5mm)0.07277150.02021870.2964240.111616
INF2Developing inflorescences (1-1.5 cm)0.035722300.02199690.0439179
ROORoots from the seedlings (10 cm shoot stage)0.921861.56360.9416321.74888
NODDeveloping tillers at six leaf stage, 3rd internode0.1246690.1121140.09345790.355123
CAR5Developing grain, bracts removed (5 DPA)0.08470350.3167270.2131890.233601
CAR15Developing grain, bracts removed (15 DPA)0.5972190.2296610.3204410.994266



CDS Structure of MLOC_68843






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68843.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361777NoneNoneNoneNone
AK373375NoneNoneNoneNone
MLOC_68843.4CUST_436_PI427708083AvailableAvailablecontig_55447 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g45920.1 -1 5e-166 490 262/341 (77%) 13104.m04608 protein protein kinase domain containing protein, expressed
TAIR PP10 AT5G47070.1 -1 3e-100 318 171/327 (52%) Protein kinase superfamily protein | chr5:19118683-19120528 REVERSE LENGTH=410