- Predicted Gene MLOC_68838
MLOC_68838 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 15.4478 | 11.3392 | 11.5245 | 14.3708 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.6446 | 17.0795 | 17.0882 | 14.274 |
| INF1 | Young developing inflorescences (5mm) | 6.96013 | 5.48786 | 5.83387 | 6.12511 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.98848 | 7.73976 | 8.34017 | 10.5687 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 28.6529 | 16.373 | 16.4896 | 22.431 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 10.5452 | 17.9335 | 10.771 | 42.5955 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.3268 | 17.1248 | 11.6725 | 15.6088 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.01722 | 1.86411 | 2.14173 | 5.65843 |
CDS Structure of MLOC_68838
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68838.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g30160.1 |
+2 |
1e-42 |
149 |
108/147 (73%) |
13109.m03007 protein zinc finger, C3HC4 type domain containing protein, expressed |
| TAIR PP10 |
AT2G04240.2 |
+2 |
6e-16 |
75 |
51/146 (35%) |
| Symbols: XERICO | RING/U-box superfamily protein | chr2:1461816-1462304 REVERSE LENGTH=162 |