MLOC_68825 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains175.386204.162191.559196.885
LEAShoots from the seedlings (10 cm shoot stage)80.896237.154725.318440.1005
INF1Young developing inflorescences (5mm)311.916291.403303.652268.909
INF2Developing inflorescences (1-1.5 cm)211.582162.585128.983199.917
ROORoots from the seedlings (10 cm shoot stage)80.672794.949189.9205111.93
NODDeveloping tillers at six leaf stage, 3rd internode4.889511.235058.73328.10307
CAR5Developing grain, bracts removed (5 DPA)49.22561.074560.993760.126
CAR15Developing grain, bracts removed (15 DPA)28.850722.735422.671664.0441



CDS Structure of MLOC_68825






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68825.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68825.1CUST_13046_PI427708083AvailableAvailablecontig_554 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g07010.1 +2 5e-12 62 27/28 (96%) 13112.m00726 protein ribosomal protein L3, putative, expressed
TAIR PP10 AT1G61580.1 +2 2e-12 63 27/28 (96%) | Symbols: RPL3B, ARP2 | R-protein L3 B | chr1:22720833-22722402 REVERSE LENGTH=390