MLOC_68812 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.08640.7871980.4761530.839231
LEAShoots from the seedlings (10 cm shoot stage)0.137910.4110710.3464990.288045
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.0389449000.0494024
ROORoots from the seedlings (10 cm shoot stage)5.698952.41396.058413.95387
NODDeveloping tillers at six leaf stage, 3rd internode0.1901560.2052050.1836990.540742
CAR5Developing grain, bracts removed (5 DPA)0.3263840.2663540.1658690.288826
CAR15Developing grain, bracts removed (15 DPA)1.179441.451080.6250453.34208



CDS Structure of MLOC_68812






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68812.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68812.2CUST_15301_PI427708080AvailableAvailablecontig_55386 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g47620.1 -3 3e-57 186 104/154 (68%) 13107.m05077 protein universal stress protein domain containing protein, putative, expressed
TAIR PP10 AT2G47710.1 -3 4e-41 143 79/154 (51%) Adenine nucleotide alpha hydrolases-like superfamily protein | chr2:19555045-19555956 REVERSE LENGTH=162