MLOC_68770 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.742177.735328.874537.80724
LEAShoots from the seedlings (10 cm shoot stage)8.066976.854276.633145.53334
INF1Young developing inflorescences (5mm)8.6768710.170610.5977.29658
INF2Developing inflorescences (1-1.5 cm)7.456388.620747.907837.87049
ROORoots from the seedlings (10 cm shoot stage)8.809037.713069.825078.44979
NODDeveloping tillers at six leaf stage, 3rd internode9.7508211.373522.448535.3593
CAR5Developing grain, bracts removed (5 DPA)11.144713.455812.935310.6737
CAR15Developing grain, bracts removed (15 DPA)4.576564.267764.041579.17892



CDS Structure of MLOC_68770






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68770.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356750NoneNoneNoneNone
MLOC_68770.1CUST_5679_PI427708080AvailableAvailablecontig_55321 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g59490.1 -3 0.0 676 358/414 (86%) 13101.m06321 protein FAD dependent oxidoreductase domain containing protein, expressed
TAIR PP10 AT3G56840.1 -3 6e-154 471 234/381 (61%) FAD-dependent oxidoreductase family protein | chr3:21044317-21046177 FORWARD LENGTH=483