MLOC_68758 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.162510.754911.238440.929885
LEAShoots from the seedlings (10 cm shoot stage)00.075095400.0505293
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)11.985613.954215.608615.8143
NODDeveloping tillers at six leaf stage, 3rd internode0.03677050.01895200.0869456
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)000.06523180.0676282



CDS Structure of MLOC_68758






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68758.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248988.1NoneNoneNoneNone
MLOC_68758.3CUST_5677_PI427708080AvailableAvailablecontig_55308 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g32700.1 +2 1e-177 504 263/329 (80%) 13110.m02859 protein hypersensitive-induced response protein, putative, expressed
TAIR PP10 AT5G62740.1 +2 6e-159 456 237/326 (73%) | Symbols: HIR1, ATHIR1 | SPFH/Band 7/PHB domain-containing membrane-associated protein family | chr5:25201320-25202535 FORWARD LENGTH=286