MLOC_68734 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.936117.011715.658718.3857
LEAShoots from the seedlings (10 cm shoot stage)17.993412.012611.868614.0534
INF1Young developing inflorescences (5mm)39.226840.798641.790337.1334
INF2Developing inflorescences (1-1.5 cm)61.012348.772650.120663.3803
ROORoots from the seedlings (10 cm shoot stage)7.876414.201712.884320.6058
NODDeveloping tillers at six leaf stage, 3rd internode9.4390712.792416.905157.8164
CAR5Developing grain, bracts removed (5 DPA)22.335720.483522.988624.0243
CAR15Developing grain, bracts removed (15 DPA)12.218910.05118.4285126.0436



CDS Structure of MLOC_68734






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68734.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68734.1CUST_15296_PI427708080AvailableAvailablecontig_55275 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g28090.1 +1 0.0 680 382/429 (89%) 13104.m02658 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT1G09770.1 +1 0.0 572 331/550 (60%) | Symbols: ATCDC5, CDC5, ATMYBCDC5 | cell division cycle 5 | chr1:3162002-3165122 FORWARD LENGTH=844