MLOC_68729 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.570089.875949.993928.22989
LEAShoots from the seedlings (10 cm shoot stage)17.057428.743728.259719.3463
INF1Young developing inflorescences (5mm)10.666911.886912.17259.01084
INF2Developing inflorescences (1-1.5 cm)11.181212.809412.320812.3954
ROORoots from the seedlings (10 cm shoot stage)14.105714.154214.685415.7089
NODDeveloping tillers at six leaf stage, 3rd internode7.470137.6611611.645825.2592
CAR5Developing grain, bracts removed (5 DPA)10.561310.370310.60599.4185
CAR15Developing grain, bracts removed (15 DPA)6.728697.217286.8944615.0293



CDS Structure of MLOC_68729






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68729.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366336NoneNoneNoneNone
MLOC_68729.1CUST_18368_PI427708080AvailableAvailablecontig_55262 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g53700.7 -1 0.0 1285 697/837 (83%) 13102.m12459 protein DENN domain containing protein, expressed
TAIR PP10 AT5G35560.1 -1 0.0 752 429/833 (52%) DENN (AEX-3) domain-containing protein | chr5:13742458-13747464 REVERSE LENGTH=765