MLOC_68705 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.914948.794758.698958.33968
LEAShoots from the seedlings (10 cm shoot stage)14.354726.82731.909719.3152
INF1Young developing inflorescences (5mm)0.7954260.4337480.4243650.462334
INF2Developing inflorescences (1-1.5 cm)0.9571420.7612751.173161.01965
ROORoots from the seedlings (10 cm shoot stage)5.065883.447756.448254.49605
NODDeveloping tillers at six leaf stage, 3rd internode2.416922.1935.19199.26664
CAR5Developing grain, bracts removed (5 DPA)2.22892.356192.204252.17048
CAR15Developing grain, bracts removed (15 DPA)0.2906030.5168490.514291.02908



CDS Structure of MLOC_68705






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68705.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356930NoneNoneNoneNone
MLOC_68705.4CUST_5668_PI427708080AvailableAvailablecontig_55219 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g58100.1 +3 6e-97 305 196/320 (61%) 13102.m06726 protein expressed protein
TAIR PP10 AT1G17830.1 +3 4e-52 185 133/334 (40%) Protein of unknown function (DUF789) | chr1:6136118-6138172 REVERSE LENGTH=337