MLOC_68684 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.16346600
LEAShoots from the seedlings (10 cm shoot stage)0.15362000.0525707
INF1Young developing inflorescences (5mm)0.0002456880.1187980.2421210.216259
INF2Developing inflorescences (1-1.5 cm)0.146620.032397300.242136
ROORoots from the seedlings (10 cm shoot stage)00.05367700
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.15780300.07289950.00897088
CAR15Developing grain, bracts removed (15 DPA)0.0092064000



CDS Structure of MLOC_68684






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68684.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369706NoneNoneNoneNone
MLOC_68684.1CUST_434_PI427708083AvailableAvailablecontig_55177 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g26440.1 +2 1e-24 102 51/61 (84%) 13102.m02863 protein prefoldin subunit, putative, expressed
TAIR PP10 AT2G07340.2 +2 5e-19 86 40/61 (66%) | Symbols: PFD1 | PREFOLDIN 1 | chr2:3045644-3046606 FORWARD LENGTH=127