MLOC_68656 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.538826.370636.005245.47916
LEAShoots from the seedlings (10 cm shoot stage)6.876395.588125.808944.87135
INF1Young developing inflorescences (5mm)9.5870510.20088.995777.61331
INF2Developing inflorescences (1-1.5 cm)8.811089.09918.592969.43392
ROORoots from the seedlings (10 cm shoot stage)2.746635.732984.069965.57621
NODDeveloping tillers at six leaf stage, 3rd internode3.09543.073624.002129.98982
CAR5Developing grain, bracts removed (5 DPA)3.874964.453064.504513.98592
CAR15Developing grain, bracts removed (15 DPA)0.9932360.9224421.094662.15397



CDS Structure of MLOC_68656






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68656.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372628NoneNoneNoneNone
MLOC_68656.2CUST_5664_PI427708080AvailableAvailablecontig_55118 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g45890.1 -2 0.0 865 417/514 (81%) 13105.m04882 protein tRNAHis guanylyltransferase family protein, expressed
TAIR PP10 AT2G31580.1 -2 1e-166 502 251/523 (48%) tRNAHis guanylyltransferase | chr2:13441137-13445837 REVERSE LENGTH=567