- Predicted Gene MLOC_68655
MLOC_68655 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 3.92423 | 4.64593 | 3.80143 | 4.65626 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.47541 | 5.27635 | 6.56977 | 4.82134 |
INF1 | Young developing inflorescences (5mm) | 10.7164 | 10.382 | 8.98518 | 9.05133 |
INF2 | Developing inflorescences (1-1.5 cm) | 9.36593 | 9.82672 | 8.62901 | 11.1408 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.83664 | 6.17225 | 6.2906 | 7.56377 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.15966 | 2.62045 | 4.55847 | 9.85226 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.08739 | 3.69202 | 3.4682 | 4.079 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.20342 | 1.48779 | 1.01419 | 3.32926 |
CDS Structure of MLOC_68655
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68655.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g13940.1 |
+3 |
0.0 |
688 |
341/468 (73%) |
13101.m01534 protein expressed protein |
TAIR PP10 |
AT2G28130.1 |
+3 |
4e-103 |
329 |
195/463 (42%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:11988823-11991397 FORWARD LENGTH=458 |