MLOC_68655 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.924234.645933.801434.65626
LEAShoots from the seedlings (10 cm shoot stage)4.475415.276356.569774.82134
INF1Young developing inflorescences (5mm)10.716410.3828.985189.05133
INF2Developing inflorescences (1-1.5 cm)9.365939.826728.6290111.1408
ROORoots from the seedlings (10 cm shoot stage)3.836646.172256.29067.56377
NODDeveloping tillers at six leaf stage, 3rd internode2.159662.620454.558479.85226
CAR5Developing grain, bracts removed (5 DPA)4.087393.692023.46824.079
CAR15Developing grain, bracts removed (15 DPA)1.203421.487791.014193.32926



CDS Structure of MLOC_68655






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68655.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68655.1CUST_15282_PI427708080AvailableAvailablecontig_55118 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g13940.1 +3 0.0 688 341/468 (73%) 13101.m01534 protein expressed protein
TAIR PP10 AT2G28130.1 +3 4e-103 329 195/463 (42%) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:11988823-11991397 FORWARD LENGTH=458