MLOC_6864 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.79164 | 8.36641 | 7.86762 | 8.11786 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 6.46968 | 3.56035 | 3.53518 | 3.86805 |
| INF1 | Young developing inflorescences (5mm) | 15.2798 | 13.9547 | 13.3858 | 12.0901 |
| INF2 | Developing inflorescences (1-1.5 cm) | 10.7777 | 11.549 | 9.62856 | 11.9331 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.02228 | 5.25722 | 6.36196 | 6.32348 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.465131 | 0.610535 | 1.39787 | 2.43682 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.01042 | 7.11828 | 6.53494 | 6.81927 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.95398 | 1.70014 | 1.6597 | 4.23613 |
CDS Structure of MLOC_6864
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6864.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g34854.1 |
+1 |
1e-110 |
330 |
174/243 (72%) |
13112.m03557 protein RNA polymerase Rpb7, N-terminal domain containing protein, expressed |
| TAIR PP10 |
AT1G75670.2 |
+1 |
4e-44 |
155 |
86/204 (42%) |
DNA-directed RNA polymerases | chr1:28415378-28416505 REVERSE LENGTH=196 |
