MLOC_68610 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.621122.520718.335322.4366
LEAShoots from the seedlings (10 cm shoot stage)5.5159514.410923.669812.4068
INF1Young developing inflorescences (5mm)0.01535810.01816580.0195820.0167776
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)78.880288.784139.095495.1754
NODDeveloping tillers at six leaf stage, 3rd internode0.05335130.1810290.3798620.641224
CAR5Developing grain, bracts removed (5 DPA)0.1432320.4476980.2542360.319186
CAR15Developing grain, bracts removed (15 DPA)1.833222.258961.412055.06682



CDS Structure of MLOC_68610






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68610.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363380NoneNoneNoneNone
MLOC_68610.1CUST_18365_PI427708080AvailableAvailablecontig_55034 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g02230.1 -3 0.0 753 407/556 (73%) 13108.m00160 protein FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed
TAIR PP10 AT2G46750.1 -3 0.0 545 302/556 (54%) D-arabinono-1,4-lactone oxidase family protein | chr2:19208443-19210909 REVERSE LENGTH=591