MLOC_68609 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.82786.516187.5747.97927
LEAShoots from the seedlings (10 cm shoot stage)2.290274.404643.633252.65752
INF1Young developing inflorescences (5mm)2.510172.362854.10912.60129
INF2Developing inflorescences (1-1.5 cm)2.316842.484462.691512.72639
ROORoots from the seedlings (10 cm shoot stage)10.78143.716066.786325.35645
NODDeveloping tillers at six leaf stage, 3rd internode2.304073.697710.520313.7836
CAR5Developing grain, bracts removed (5 DPA)1.678111.966551.843821.78534
CAR15Developing grain, bracts removed (15 DPA)5.278723.93373.030210.4138



CDS Structure of MLOC_68609






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68609.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68609.1CUST_15279_PI427708080AvailableAvailablecontig_55034 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10 AT3G24030.1 +1 7e-91 280 152/258 (59%) hydroxyethylthiazole kinase family protein | chr3:8679862-8680812 REVERSE LENGTH=276