- Predicted Gene MLOC_68598
MLOC_68598 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.94903 | 7.15611 | 6.01881 | 7.31518 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.85201 | 2.121 | 1.46705 | 2.02734 |
| INF1 | Young developing inflorescences (5mm) | 5.223 | 5.06259 | 5.59608 | 5.10105 |
| INF2 | Developing inflorescences (1-1.5 cm) | 13.8649 | 7.51436 | 10.5574 | 12.8688 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.81287 | 2.0477 | 2.8957 | 2.60213 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 19.9853 | 18.0666 | 29.5909 | 58.5478 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.59198 | 6.6471 | 7.23924 | 8.07946 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.2586 | 0.936222 | 1.20144 | 3.01327 |
CDS Structure of MLOC_68598
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68598.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g04740.1 |
+3 |
3e-90 |
295 |
260/550 (47%) |
13105.m00487 protein helix-loop-helix DNA-binding domain containing protein, expressed |
| TAIR PP10 |
AT1G09530.2 |
+3 |
3e-28 |
119 |
66/101 (65%) |
| Symbols: PIF3, POC1, PAP3 | phytochrome interacting factor 3 | chr1:3077216-3079367 FORWARD LENGTH=524 |
