MLOC_68595 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.310312.105612.693413.4735
LEAShoots from the seedlings (10 cm shoot stage)19.8133.093226.904221.7229
INF1Young developing inflorescences (5mm)0.7598290.9907880.9629190.773168
INF2Developing inflorescences (1-1.5 cm)0.612470.9285731.083110.93768
ROORoots from the seedlings (10 cm shoot stage)40.187121.036932.897129.1053
NODDeveloping tillers at six leaf stage, 3rd internode23.059619.181626.690261.3977
CAR5Developing grain, bracts removed (5 DPA)38.366347.089845.2942.9445
CAR15Developing grain, bracts removed (15 DPA)6.564496.549915.9552315.5182



CDS Structure of MLOC_68595






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68595.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353565NoneNoneNoneNone
MLOC_68595.3CUST_5656_PI427708080AvailableAvailablecontig_55011 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g07820.1 -3 6e-80 256 154/216 (71%) 13102.m00895 protein DUF581 domain containing protein, expressed
TAIR PP10 AT1G19200.1 -3 2e-15 77 56/163 (34%) Protein of unknown function (DUF581) | chr1:6625104-6625856 REVERSE LENGTH=215