MLOC_68594 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.2078660.1088220.151464
LEAShoots from the seedlings (10 cm shoot stage)1.634670.9750591.885431.17282
INF1Young developing inflorescences (5mm)0.1116350.325970.2302560.141769
INF2Developing inflorescences (1-1.5 cm)0.1984810.05260950.08021460.110895
ROORoots from the seedlings (10 cm shoot stage)00.1466110.126430.185537
NODDeveloping tillers at six leaf stage, 3rd internode00.0310240.0286990.141783
CAR5Developing grain, bracts removed (5 DPA)0.2074650.1245070.1604290.130968
CAR15Developing grain, bracts removed (15 DPA)0.129930.043222300.266119



CDS Structure of MLOC_68594






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68594.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68594.1CUST_15277_PI427708080AvailableAvailablecontig_55011 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g07830.1 -2 0.0 722 383/532 (72%) 13102.m00896 protein OsHKT1;3 - Na+ transporter, expressed
TAIR PP10 AT4G10310.1 -2 1e-130 397 233/494 (47%) | Symbols: HKT1, ATHKT1 | high-affinity K+ transporter 1 | chr4:6392008-6395667 FORWARD LENGTH=506