- Predicted Gene MLOC_68578
MLOC_68578 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.99891 | 3.5041 | 3.37031 | 3.50012 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.50228 | 2.07281 | 2.32619 | 1.93279 |
| INF1 | Young developing inflorescences (5mm) | 7.15976 | 7.50418 | 7.84156 | 6.47863 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.92784 | 9.55447 | 8.31833 | 10.2909 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.18904 | 4.0182 | 2.74849 | 4.58264 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.96915 | 1.93082 | 2.30697 | 6.27293 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.661 | 3.98799 | 3.77191 | 3.88489 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.910011 | 0.785176 | 0.869107 | 2.07491 |
CDS Structure of MLOC_68578
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68578.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g37630.1 |
-3 |
0.0 |
984 |
475/598 (79%) |
13112.m03872 protein domain of unknown function family protein, expressed |
| TAIR PP10 |
AT1G09280.1 |
-3 |
0.0 |
694 |
350/598 (59%) |
CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). | chr1:2998209-3001253 REVERSE LENGTH=581 |