- Predicted Gene MLOC_68577
MLOC_68577 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 10.7543 | 13.2698 | 12.2958 | 14.1153 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 23.8197 | 20.429 | 20.5759 | 19.4903 |
INF1 | Young developing inflorescences (5mm) | 10.661 | 9.66834 | 10.0088 | 9.51871 |
INF2 | Developing inflorescences (1-1.5 cm) | 9.55959 | 10.023 | 10.6511 | 12.4868 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.861089 | 3.61409 | 2.90056 | 4.29396 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.4956 | 3.06969 | 9.06863 | 14.119 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.11719 | 7.67549 | 6.3982 | 8.19439 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.990044 | 0.551735 | 0.788414 | 2.04402 |
CDS Structure of MLOC_68577
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68577.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g37610.1 |
+1 |
1e-111 |
340 |
196/259 (76%) |
13112.m03870 protein ribosomal protein S6, putative, expressed |
TAIR PP10 |
AT3G17170.1 |
+1 |
2e-75 |
245 |
117/179 (65%) |
| Symbols: RFC3 | Translation elongation factor EF1B/ribosomal protein S6 family protein | chr3:5853186-5854853 REVERSE LENGTH=314 |