MLOC_68565 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9527891.405221.222621.22697
LEAShoots from the seedlings (10 cm shoot stage)0.9141310.3314250.495840.503734
INF1Young developing inflorescences (5mm)2.897373.363042.630362.5026
INF2Developing inflorescences (1-1.5 cm)2.528343.518232.80333.22092
ROORoots from the seedlings (10 cm shoot stage)0.8282991.395721.25041.51478
NODDeveloping tillers at six leaf stage, 3rd internode0.3780980.4965440.8412361.82998
CAR5Developing grain, bracts removed (5 DPA)4.236723.317753.850943.55449
CAR15Developing grain, bracts removed (15 DPA)0.8593340.9409210.7252552.0017



CDS Structure of MLOC_68565






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68565.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68565.1CUST_15271_PI427708080AvailableAvailablecontig_54959 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g25050.1 -3 0.0 764 415/560 (74%) 13109.m02390 protein PPR repeat domain containing protein, putative, expressed
TAIR PP10 AT5G61400.1 -3 3e-102 332 184/499 (37%) Pentatricopeptide repeat (PPR) superfamily protein | chr5:24681550-24683514 FORWARD LENGTH=654