MLOC_6856 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 26.8943 | 22.2438 | 22.8821 | 26.7943 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 21.391 | 18.1527 | 19.5457 | 19.1957 |
| INF1 | Young developing inflorescences (5mm) | 35.0146 | 43.6506 | 45.9638 | 38.1408 |
| INF2 | Developing inflorescences (1-1.5 cm) | 36.4273 | 46.9146 | 40.9908 | 51.7275 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 23.3421 | 24.7271 | 23.8121 | 34.7081 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 20.3796 | 21.8919 | 26.0358 | 90.088 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 42.4044 | 44.7808 | 43.0141 | 48.365 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 10.4376 | 10.5404 | 8.92083 | 26.4975 |
CDS Structure of MLOC_6856
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6856.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g10120.2 |
-2 |
0.0 |
709 |
364/386 (94%) |
13103.m01128 protein proteasome subunit, putative, expressed |
| TAIR PP10 |
AT5G42970.1 |
-2 |
0.0 |
642 |
326/386 (84%) |
| Symbols: COP8, FUS4, EMB134, COP14, CSN4, FUS8, ATS4 | Proteasome component (PCI) domain protein | chr5:17237470-17240649 REVERSE LENGTH=397 |
