MLOC_6853 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.52347 | 4.25309 | 3.48167 | 3.70782 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.02734 | 0.492692 | 0.45868 | 0.927107 |
| INF1 | Young developing inflorescences (5mm) | 18.8026 | 19.0867 | 16.5648 | 15.2657 |
| INF2 | Developing inflorescences (1-1.5 cm) | 17.8573 | 20.1095 | 16.0494 | 20.0963 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.772952 | 2.29174 | 1.30484 | 2.57453 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.444144 | 0.661256 | 1.02069 | 2.60144 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.92929 | 7.01395 | 6.82015 | 6.71655 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.54254 | 1.47201 | 1.36007 | 3.29596 |
CDS Structure of MLOC_6853
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6853.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g19190.1 |
+3 |
0.0 |
587 |
306/532 (58%) |
13103.m02293 protein TOPBP1C - Similar to DNA replication protein TOPBP1 from, expressed |
| TAIR PP10 |
AT4G02110.1 |
+3 |
2e-89 |
319 |
194/504 (38%) |
transcription coactivators | chr4:935191-940191 FORWARD LENGTH=1329 |