- Predicted Gene MLOC_68525
MLOC_68525 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.290065 | 0.578149 | 0.374755 | 0.447987 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.331813 | 0.456178 | 0.744153 | 0.452066 |
| INF1 | Young developing inflorescences (5mm) | 0.106491 | 0.105518 | 0.146975 | 0.0942589 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.773724 | 0.698153 | 1.18066 | 0.867979 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.722492 | 1.2518 | 0.760919 | 1.39862 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.058222 | 0.202718 | 0.0933301 | 0.669462 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.90471 | 1.68091 | 1.57475 | 1.60178 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.623898 | 0.958179 | 0.471143 | 1.53008 |
CDS Structure of MLOC_68525
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_68525.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g01740.1 |
+1 |
0.0 |
1951 |
987/1181 (84%) |
13102.m00099 protein U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed |
| TAIR PP10 |
AT1G20960.2 |
+1 |
0.0 |
1631 |
829/1188 (70%) |
| Symbols: emb1507 | U5 small nuclear ribonucleoprotein helicase, putative | chr1:7302591-7309914 REVERSE LENGTH=2171 |