MLOC_68518 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.05072.583242.440254.26867
LEAShoots from the seedlings (10 cm shoot stage)3.10882.195285.273312.08208
INF1Young developing inflorescences (5mm)1.488411.576222.488281.40938
INF2Developing inflorescences (1-1.5 cm)1.862622.825412.421982.39982
ROORoots from the seedlings (10 cm shoot stage)3.130992.796482.199991.96795
NODDeveloping tillers at six leaf stage, 3rd internode6.443665.766523.970567.5463
CAR5Developing grain, bracts removed (5 DPA)3.039982.42652.598792.34943
CAR15Developing grain, bracts removed (15 DPA)0.2099350.340050.1186670.484686



CDS Structure of MLOC_68518






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68518.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68518.1CUST_9218_PI427708083AvailableAvailablecontig_54906 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g40150.2 -2 2e-28 120 65/135 (48%) 13108.m04291 protein AT hook motif domain containing protein, expressed
TAIR PP10 AT4G12080.1 -2 3e-28 119 62/136 (46%) | Symbols: AHL1, ATAHL1 | AT-hook motif nuclear-localized protein 1 | chr4:7239466-7241246 FORWARD LENGTH=356