MLOC_68517 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains88.64180.124495.507475.3308
LEAShoots from the seedlings (10 cm shoot stage)60.788162.390185.192951.9707
INF1Young developing inflorescences (5mm)10.423611.860818.62679.1163
INF2Developing inflorescences (1-1.5 cm)7.205597.1561611.10657.47758
ROORoots from the seedlings (10 cm shoot stage)113.181.187577.602490.829
NODDeveloping tillers at six leaf stage, 3rd internode71.00650.124840.0028142.948
CAR5Developing grain, bracts removed (5 DPA)56.889659.449155.042946.7895
CAR15Developing grain, bracts removed (15 DPA)15.79316.416116.208430.1001



CDS Structure of MLOC_68517






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68517.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370437NoneNoneNoneNone
MLOC_68517.1CUST_5644_PI427708080AvailableAvailablecontig_54906 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g46960.2 +1 3e-97 312 153/168 (91%) 13104.m04747 protein glutathione peroxidase domain containing protein, expressed
TAIR PP10 AT4G11600.1 +1 3e-89 291 138/166 (83%) | Symbols: ATGPX6, PHGPX, LSC803, GPX6 | glutathione peroxidase 6 | chr4:7010021-7011330 REVERSE LENGTH=232