MLOC_68507 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.891151.912132.113821.83955
LEAShoots from the seedlings (10 cm shoot stage)6.317424.11545.582943.79842
INF1Young developing inflorescences (5mm)2.96343.387453.097052.07384
INF2Developing inflorescences (1-1.5 cm)3.238812.726733.097352.64312
ROORoots from the seedlings (10 cm shoot stage)1.328282.379931.401421.9385
NODDeveloping tillers at six leaf stage, 3rd internode1.049831.540671.976934.15216
CAR5Developing grain, bracts removed (5 DPA)2.158522.107272.458171.64271
CAR15Developing grain, bracts removed (15 DPA)0.5586340.9822660.8741851.33443



CDS Structure of MLOC_68507






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68507.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68507.1CUST_13039_PI427708083AvailableAvailablecontig_54892 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g62680.1 -3 1e-95 308 146/190 (77%) 13103.m06937 protein hypothetical protein
TAIR PP10 AT2G31870.2 -3 3e-49 182 101/229 (44%) | Symbols: TEJ | Poly (ADP-ribose) glycohydrolase (PARG) | chr2:13549999-13553756 REVERSE LENGTH=547