MLOC_68500 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.766477.018077.444546.71189
LEAShoots from the seedlings (10 cm shoot stage)1.538520.308690.5141180.60801
INF1Young developing inflorescences (5mm)000.0522070.0741714
INF2Developing inflorescences (1-1.5 cm)0.0213109000.0266423
ROORoots from the seedlings (10 cm shoot stage)15.981811.33698.7963910.597
NODDeveloping tillers at six leaf stage, 3rd internode3.48653.482971.001796.37115
CAR5Developing grain, bracts removed (5 DPA)6.54516.673525.497065.7229
CAR15Developing grain, bracts removed (15 DPA)0.2367240.2999160.3661710.693765



CDS Structure of MLOC_68500






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68500.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361811NoneNoneNoneNone
MLOC_68500.1CUST_5642_PI427708080AvailableAvailablecontig_54880 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g39360.1 +2 0.0 687 379/480 (79%) 13107.m04077 protein transporter family protein, putative, expressed
TAIR PP10 AT2G16120.1 +2 0.0 536 293/491 (60%) | Symbols: PMT1, ATPMT1 | polyol/monosaccharide transporter 1 | chr2:6996727-6998441 REVERSE LENGTH=511