MLOC_68497 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains79.045191.114387.216788.6509
LEAShoots from the seedlings (10 cm shoot stage)71.711340.888640.428245.0723
INF1Young developing inflorescences (5mm)218.698205.85231.669182.804
INF2Developing inflorescences (1-1.5 cm)263.523244.733276.853281.116
ROORoots from the seedlings (10 cm shoot stage)52.512891.674100.859107.753
NODDeveloping tillers at six leaf stage, 3rd internode5.896998.6891731.572544.7878
CAR5Developing grain, bracts removed (5 DPA)108.031106.493103.907101.576
CAR15Developing grain, bracts removed (15 DPA)51.99544.640948.3729112.956



CDS Structure of MLOC_68497






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_68497.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_68497.2CUST_9215_PI427708083AvailableAvailablecontig_54876 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g07490.1 -3 0.0 544 340/631 (54%) 13107.m00732 protein YT521-B, putative, expressed
TAIR PP10 AT5G61020.2 -3 3e-109 347 199/366 (54%) | Symbols: ECT3 | evolutionarily conserved C-terminal region 3 | chr5:24557485-24559780 REVERSE LENGTH=493